BMW 540i 1999 E39 Workshop Manual
Manufacturer: BMW, Model Year: 1999, Model line: 540i, Model: BMW 540i 1999 E39Pages: 1002
Page 571 of 1002

Downloaded from www.Manualslib.com manuals search engine 
230-7 
Manual Transmission 
Place drain pan under  transmission  and remove drain  plug 
(A) at bottom  of transmission. 
Drain  fluid. 
lnstall  and torque  drain plug. 
Remove  fill plug 
(6) from  side of transmission. 
Slowly fill  transmission  with  fluid until fluid overflows fill 
hole. 
lnstall  and torque fluid  fill 
plug. 
NOJE- 
5-speed  transmission shown  in illustration.  6-speed trans- 
mission  is similar. 
Fluid  capacity 
Initial fill 
newirebuilt Transmission  unit  Fluid change 
Getrag S5D 250G 1.1 liter (1.2 US qt) 1.0 liter (1 .l US qt) 
Getrag S6S 420G 1.9 liter (2.0 US qt) 1.7 liter (1.8 US qt) 
ZF S5D 3202 1.3 liter (1.4 US at) 1.2 liter (1.3 US qt) 
Tightening torque 
Transmission drain  or 
fill plug to transmission  50 
Nm (37 ft-lb) 
case 
Back-up light  switch, replacing 
- Raise and  safely support  vehicle to access  back-up light 
switch. 
WARNING - 
4 Unscrew switch  from transmission. 
Back-up  light switch location  on transmission  varies. 
Refer  to illustration. 
- Install  new switch. 
Tightening torque  Back-up  light switch 
18 Nm (13 ft-lb) 
to  transmission 
ission fluid level before  lowering vehicle.    
Page 572 of 1002

Downloaded from www.Manualslib.com manuals search engine 
Manual Transmission Selector shaft seal, replacing 
(transmission  installed) 
- Put transmission into second  gear. 
- Raise and safely support  vehicle. 
WARNING- 
Make sure  the car  is stable  and well supported  at all times. 
Use  a professional  automotive lift 
orjack stands designed  for 
the  purpose. 
A floorjack is not  adequate  support 
- 6-speed transmission:  Remove rear  engine splash shield 
- Remove exhaust system and heat shields. See 180 Exhaust 
System. 
- Support transmission with transmission  jack. 
- Disconnect driveshaft at transmission and tie to  side.  See 
260 Driveshaft. 
4 Remove  transmission crossmember: 
Where  applicable,  release electrical harnesses  from 
transmission  crossmember. 
. Remove transmission mounting bolts (A). 
Remove transmission crossmember bolts  (B). 
Where  applicable,  remove  bolts 
(C). 
NOTE- 
5-speed  transmission shown  in illustration.  6-speed  trans- 
mission  is similar. 
- Tilt down rear  of transmission. 
CAUTION- 
Jilting  the engine  to lower  the transmission  can lead  to 
damaae  to various  components  due to lack  of clearance. 
- 
4 Pry sprlng locking rlng (A)  out of groove  and press pin 
of 
sh~fl rod. 
Detach 
sh~ft rod  from  selector  shafl and tie as~de. 
(B) out    
Page 573 of 1002

Downloaded from www.Manualslib.com manuals search engine 
230-9 
Manual ~ransmissionl 
Carefully pry out selector  shaft oil seal with  BMW special  tool 
23 
0 210, or with  a narrow  seal remover  or small screwdriver. 
Coat  new selector shaft seal  with transmission fluid.  Drive 
new  seal  in flush  with housing. Use 
BMW special  seal instal- 
lation tool 
23 0 220 or  equivalent  and a soft-faced  (plastic) 
hammer. 
- Remainder  of installation  is reverse  of removal,  noting the fol- 
lowing: 
Install  driveshaft  using new 
loclc nuts. 
Check  transmission oil level,  topping up as  necessary. 
Tightening torques  Aluminum  driveshaft to flex-disc 
. MI2 (use Dacromet-coated washers)  90 Nm  (66 ft-lb) 
Driveshaft CV joint  to final  drive  flange 
MI 0 (Torx  bolt)  70 
Nm  (51 ft-lb) 
M8 (compression nut)  32 
Nm  (24 ft-lb) 
Flex-disc  to transmission flange  or driveshaft 
MI0 (8.8  grade) 48 Nm (35 ft-lb) 
MI0 (10.9  grade)  60 
Nm  (44 it-lb) 
MI2 (8.8  grade)  81 
Nm (60 ft-lb) 
MI2 (10.9  grade) lo0 Nm (74 ft-lb) 
- MI4 140  Nm (103 ft-lb) 
Transmission crossmember 
to transmission (ME) 21  Nm (15 ft-lb) 
. to chassis (M10) 42  Nm  (30 ft-lb)    
Page 574 of 1002

Downloaded from www.Manualslib.com manuals search engine 
230-1 0 
I Manual Transmission 
Output shaft seal, replacing  (5-speed 
transmission) (transmission installed) 
- Raise and safely support  vehicle. 
WARNING - 
Make sure the car is stable  and well supported  at all times. 
Use a professional  automotive 
lilt orjack stands designed 
for  the  purpose. 
A floorjack is not  adequate support. 
- Remove exhaust system  and heat shields. See 180 Exhaust 
System 
Support transmission  with transmission jack. 
Disconnect driveshafi  at transmission output flange, and 
hang driveshaft to  side. See 
260 Driveshaft. 
Remove  transmission crossmember: 
If  applicable, release electrical harnesses from transmis- 
sion  crossmember. 
Remove transmission mounting bolts 
(A). 
Remove  transmission crossmember bolts (6). 
Where applicable,  remove bolts (C). 
- Tilt down  rear  of transmission. 
CAUTIOI\C 
Tilting  the engine to  lower the transmission  can lead  to 
damage  to various components due  to lack  of clearance. 
4 Remove  collar nut with  BMW  special tool (see table below)  or 
suitable thin-walled  deep 
socltet. Use BMW  special tool 
23 0 020 or equivalent to counterhold  output flange. 
Collar nut sockets 
Transmission 
BMW special  tool 
Getrag S5D 250G 23 1 21 0 (27 mm) 
ZF S5D 3202 23  2 320  (36 mm) 
Use puller (BMW special tool 33 1 150 or equivalent)  to 
remove output  flange. 
Use  BMW  special tool 
00 5 010 or other suitable  seal puller 
to remove seal from transmission housing.    
Page 575 of 1002

Downloaded from www.Manualslib.com manuals search engine 
230-1 1 
Manual ~ransmissionl 
Coat new seal  with transmission  fluid.  Use seal installation 
drift (see  table below) to drive  seal into position until it is flush 
with  housing. 
Output seal drives 
Transmission 
BMW special  tool 
Getrag S5D 250G 240110 
ZF S5D 3202 23 2 300 
inspect sealing surface  on output flange.  Replace if flange 
surface  is worn or  damaged. 
Heat output flange  to about 176" 
F (80" C) to  aid in installa- 
tion.  This  can be  done by placing  flange in hot water. Rein- 
stall  output flange  to output shaft. 
- Coat flange  nut with LoctiteB243 and  reinstall.  Torque in two 
stages. 
Tightening torques Output flange  to output shaft 
Stage I 190  Nm (140 ft-lb) 
Stage II (after loosening)  120 
Nm (89 ft-lb) 
- Remainder  of installation is  reverse of removal,  noting the  fol- 
lowing: 
Install driveshaft  using new nuts. See 
260 Driveshaft. 
Check transmission fluid  level, topping  up as necessary 
Tightening torques  Aluminum  driveshaft to flex-disc 
- MI2 (use  Dacromet-coated  washers) 90 Nm (66 ft-lb) 
Driveshaft 
CV joint  to final  drive flange 
. MI0 (Torx  bolt)  70 
Nm  (51 ft-lb) 
. M8 (compression nut)  32 
Nm  (24 ft-lb) 
Flex-disc  to transmission  flange  or driveshaft 
- MI0 (8.8 grade)  48 
Nm  (35 ft-lb) 
- MI0 (10.9 grade)  60 
Nm  (44 It-lb) 
. MI2 (8.8  grade) 81 Nm (60 ft-lb) 
. MI2 (10.9  grade) I00 Nm (74 It-lb) 
M14  140 Nm (103 It-lb) 
Transmission crossmember 
- to transmission (ME) 21  Nm  (15 It-lb) 
- to chassis (M10) 42  Nm  (30 It-lb)    
Page 576 of 1002

Downloaded from www.Manualslib.com manuals search engine 
230-12 
/ Manual Transmission 
Output shaft seal, replacing (6-speed 
transmission) (transmission installed) 
- Raise  and safely  support vehicle. 
WARNING- 
Make sure the car  is stable  and well supported  at all times. 
Use  a professional  automotive lift 
orjack stands designed for 
the  purpose. 
A floorjack is not  adequate  support. 
- Remove exhaust  system and heat shields. See 180 Exhaust 
System. 
- Support transmission with transmission jack 
- Disconnect driveshaft at transmission  output flange, and 
hang driveshaft  to side. See 
260 Driveshaft. 
Remove  transmission crassmember: 
If  applicable, release electrical harnesses  from transmis- 
sion crossmember. 
Remove  transmission  and crossmember mounting bolts 
(arrows). 
5022305201 - Tilt down  rear of transmission 
CAUTION- 
Tlting the  engine to  lower the transmission  can lead  to dam- 
age  to various  components  due to lack  of clearance. 
Use screwdriver to pry  out output flange collar nut retaining 
plate. 
Remove  collar nut  with BMW  special tool 
23 2 320 or equiv- 
alent  thin-walled deep socltet 
(36 mm).  Use BMW  special 
tool 
23 0 020 or  equivalent to counterhold  output flange.    
Page 577 of 1002

Downloaded from www.Manualslib.com manuals search engine 
230-1 3 
Manual ~ransmissionl 
I 4 Remove shims under collar nut  and set aside. 
- Use  puller  to remove output flange 
4 Use  BMW special tool 00 5 010 or other suitable  seal puller 
to  remove seal from transmission  housing. 
4 Coat  new seal with transmission fluid.  Use seal installation 
drift,  BMW special tool 23  2 480 or equivalent, to drive seal 
into housing as far as  it will  go. 
- Inspect sealing surface  on output flange.  Replace if worn or 
damaged. 
- Coat sealing  lip  of seal, sealing surface  of output flange and 
transmission  splined shaft with transmission  oil. 
4 Press output flange on output  shafl using  BMW special tool 
23  3 
010. 
. Counterhold flange with  BMW special tool  23 0 020. 
Tighten  special tool  23 2 010  to 200  Nm 
(148 ft-lb). 
Remove 
special tools.    
Page 578 of 1002

Downloaded from www.Manualslib.com manuals search engine 
230-14 
I Manual Transmission 
If installing  new output  flange:  Recalculate  thickness of 
shims based  on difference  in height between output shaft 
surface  and collar  nut support  surface.  Shims must  be within 
the  output  flange preload  specification  below the collar  nut 
support  surface. 
Output flange preload  Difference  between heights  of shaft  and output  0.05 
- 0.22 mm 
flange  sealing 
suriace MINUS  thickness  of shims  (0.002 - 0.009 in) 
NOTE- 
Shims  are available in increasing  sizes of 0.1 mm from 
1.4 mm to 2.1 mm (0.055 in to 0.083 in) from BMWparts. 
- Install  shims.  Install and torque  flange  collar  nut. 
Tightening torques  Output flange  to  out put shaft 
. Stage  I  190 Nm (140  ft-lb) 
. Stage II (after loosening)  120 Nm (89 it-lb) 
- Use BMW special tool 23 2 470 to install flange  nut retaining 
plate. 
- Remainder  of installation is  reverse of removal,  noting the  fol- 
lowing: 
Install  driveshaft  using new nuts. See 
260 Driveshaft. 
Checlc transmission fluid  level, topping  up as  necessary. 
Tightening torques 
Aluminum driveshaft  to flex-disc 
- MI2 (use  Dacromet-coated  washers)  90 Nm  (66 ft-lb) 
Driveshaft 
CV joint  to final  drive flange 
MI0 (Tom bolt) 
70 Nm  (51 ft-lb) 
M8 (compression nut)  32 Nm  (24 ft-lb) 
Flex-disc  to transmission flange  or driveshaft 
* MI0 (8.8 grade)  48 Nm  (35 ft-lb) 
- MI0 (10.9  grade)  60 Nm  (44 ft-lb) 
. MI2 (8.8  grade) 
81 Nm  (60 ft-lb) 
MI2 (10.9  grade) 100 Nm (74 ft-lb) 
- MI4 140  Nm (1 03  ft-lb) 
Transmission 
crossmembe~ 
to  transmission (ME) 
to chassis (M10) 
21  Nm  (15 ft-lb) 
42  Nm  (30 it-lb)    
Page 579 of 1002

Downloaded from www.Manualslib.com manuals search engine 
Manual Transmission 
Input shaft seal, replacing 
(transmission removed) 
- Remove transmission  from vehicle as  described later in this 
group. 
- Remove clutch release  bearing end release bearing  lever 
from  inside  bellhousing. 
4 Remove bolts  (arrows) for clutch  release-bearing guide 
sleeve,  noting bolt  lengths 
(Getrag trensmission  shown). 
Remove sleeve  and any spacers (shims) under  it. 
Two  covered  removal holes  (arrows) are present  in seal. 
Thread  BMW special tool 
23 0 490 or equivalent slide ham- 
mer seal  puller into one hole and  remove seal. 
- Getreg S5D 250G transmission: 
Place BMW special tool 
23 2 460 or similar  protective 
sleeve over input shaft. 
Coat sealing lip  of new 
seel with trensmission oil  and push 
over protective sleeve  up to transmission  housing. 
Remove protective sleeve from input shaft. 
Use  BMW special tool 
23 2 430 or similar  drifl to drive seal 
until fully  seated. 
- ZF S5D 3202 transmission: 
Place BMW special tool 
23  2 380 or similar protective 
sleeve over input shaft. 
Coat sealing lip  of new  seal with transmission oil and push 
over protective sleeve  up to transmission  housing. 
* Remove protective sleeve from  input shaft. 
Use  BMW  special  tool 
23 2 340 or similar drift to drive seal 
until fully seated. 
- 6-speed  transmission: 
Fit 
cap of  BMW special tool 23  2 492 over tool  sleeve. 
Coat  sealing 
lip of new seal with transmission oil  and push 
on tool  sleeve.  Remove tool cap  from tool sleeve. 
- Push sleeve with seal  on input shaft. 
- Use BMW special  tool 23 2 491 or similar drift to drive seel 
until fully  seated. 
Remove protective sleeve from  input shaft.    
Page 580 of 1002

Downloaded from www.Manualslib.com manuals search engine 
Manual Transmission 
- Thoroughly  clean guide sleeve mounting bolts, sealing  sur- 
faces,  and threads. Apply 
Loctite8243 or equivalent  thread 
locking compound  to guide sleeve bolts. Reinstall  guide 
sleeve  and 
spacer(s). 
Tightening torques 
Guide sleeve  to transmission  case 
M6  10 Nm (89 in-lb) 
* M8 x 22 18 Nm (13 ft-lb) 
- Max30 25 Nm (18 ft-lb) 
- Reinstall transmission. 
TRANSMISSION REMOVAL AND 
~NSTALLATION 
Removal  and installation  of the  transmission is  best accorn- 
plished on a lifl using  a transmission jack.The engine must  be 
supported  using appropriate  support equipment.  This allows 
the  engine  to pivot  on its mounts  to access  the upper 
Torx- 
head  bolts at the  bellhousing. 
WARNING- 
Male sure the car  is stable  and well supported  at all times. 
Use  a professional  aulomorive lift or jack slanos des~gned 
lor the purpose. A floor jack  is nor adequare supporr. 
The  removal  of the  transmission  may upset  the balance 
of  the  vehicle  on a 
lifl. 
Transmission, removing and installing 
- Disconnect  negative (-) cable from  battery. 
CAUTION- 
Prior  to disconnecting the battery,  read the battery discon- 
nection cautions given 
in 001 Warnings  and Cautions. 
V-8 engine:  Remove plastic  engine  cover. 
Early  models:  pry out protective caps  (arrows), then re- 
move nuts securing  cover. Lift off cover. 
Later  models:  depress  four studs  to release, then 
lift off 
cover. 
- Raise  and safely  support vehicle 
- Remove engine  splash shield from  underside  of vehicle 
- Remove exhaust  system and heat shields. See 180 Exhaust 
System.